IBF Instituto Biofisika

2009

1. 3D entropy and moments prediction of enzyme classes and experimental-theoretic study of peptide fingerprints in Leishmania parasites

   Biochimica et Biophysica Acta - Proteins and Proteomics, Vol. 1794, Núm. 12, pp. 1784-1794

2. A Symmetrical Tetramer for S. aureus Pyruvate Carboxylase in Complex with Coenzyme A

   Structure, Vol. 17, Núm. 6, pp. 823-832

3. A minimal model for congestion phenomena on complex networks

   Journal of Statistical Mechanics: Theory and Experiment, Vol. 2009, Núm. 8

4. A model of ischemia-induced neuroblast activation in the adult subventricular zone

   PLoS ONE, Vol. 4, Núm. 4

5. A network-QSAR model for prediction of genetic-component biomarkers in human colorectal cancer

   Journal of Theoretical Biology, Vol. 261, Núm. 3, pp. 449-458

6. Alignment-free prediction of a drug-target complex network based on parameters of drug connectivity and protein sequence of receptors

   Molecular Pharmaceutics, Vol. 6, Núm. 3, pp. 825-835

7. Alignment-free prediction of mycobacterial DNA promoters based on pseudo-folding lattice network or star-graph topological indices

   Journal of Theoretical Biology, Vol. 256, Núm. 3, pp. 458-466

8. Alignment-free prediction of polygalacturonases with pseudofolding topological indices: Experimental isolation from coffea arabica and prediction of a new sequence

   Journal of Proteome Research, Vol. 8, Núm. 4, pp. 2122-2128

9. Attenuation of Notch signalling by the Down-syndrome-associated kinase DYRK1A

   Journal of Cell Science, Vol. 122, Núm. 10, pp. 1574-1583

10. Between-Species Variation in the Kinetic Stability of TIM Proteins Linked to Solvation-Barrier Free Energies

    Journal of Molecular Biology, Vol. 385, Núm. 3, pp. 924-937

11. Calcium inhibits diacylglycerol uptake by serum albumin

    Biochimica et Biophysica Acta - Biomembranes, Vol. 1788, Núm. 3, pp. 701-707

12. Carbodiimide EDC induces cross-links that stabilize RNase a C-dimer against dissociation: EDC adducts can affect protein net charge, conformation, and activity

    Bioconjugate Chemistry, Vol. 20, Núm. 8, pp. 1459-1473

13. Carbohydrate-aromatic interactions: A computational and IR spectroscopic investigation of the complex, methyl α-l-fucopyranoside · toluene, isolated in the gas phase

    Chemical Physics Letters, Vol. 471, Núm. 1-3, pp. 17-21

14. Ceramide-induced transbilayer (flip-flop) lipid movement in membranes.

    Methods in molecular biology (Clifton, N.J.), Vol. 462, pp. 155-165

15. Cholesterol reverts Triton X-100 preferential solubilization of sphingomyelin over phosphatidylcholine: A 31P-NMR study

    FEBS Letters, Vol. 583, Núm. 17, pp. 2859-2864

16. Cis- Versus trans-ceramides: effects of the double bond on conformation and h-bonding interactions

    Journal of Physical Chemistry B, Vol. 113, Núm. 46, pp. 15249-15255

17. Coexistence of immiscible mixtures of palmitoylsphingomyelin and palmitoylceramide in monolayers and bilayers

    Biophysical Journal, Vol. 97, Núm. 10, pp. 2717-2726

18. Complex network spectral moments for ATCUN motif DNA cleavage: First predictive study on proteins of human pathogen parasites

    Journal of Proteome Research, Vol. 8, Núm. 11, pp. 5219-5228

19. Computational chemistry study of 3D-structure-function relationships for enzymes based on markov models for protein electrostatic, HINT, and van der waals potentials

    Journal of Computational Chemistry, Vol. 30, Núm. 9, pp. 1510-1520

20. Conformational change and selectivity in explicitly hydrated carbohydrates

    Tetrahedron Asymmetry, Vol. 20, Núm. 6-8, pp. 718-722