Publicaciones en colaboración con investigadores/as de Memorial Sloan Kettering Cancer Center (16)

2008

  1. Ab initio thermodynamic modeling of distal multisite transcription regulation

    Nucleic Acids Research, Vol. 36, Núm. 3, pp. 726-731

  2. Failure of the work-hamiltonian connection for free-energy calculations

    Physical Review Letters, Vol. 100, Núm. 2

  3. Protein-protein/DNA interaction networks: Versatile macromolecular structures for the control of gene expression

    IET Systems Biology

  4. Vilar and Rubi reply

    Physical Review Letters

2007

  1. Multilevel deconstruction of the in vivo behavior of looped DNA-protein complexes

    PLoS ONE, Vol. 2, Núm. 4

  2. Stochastic population dynamics in turbulent fields

    European Physical Journal: Special Topics, Vol. 146, Núm. 1, pp. 177-187

  3. Synthetic cooperation in engineered yeast populations

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, Núm. 6, pp. 1877-1882

2006

  1. DNA looping: the consequences and its control

    Current Opinion in Structural Biology, Vol. 16, Núm. 3, pp. 344-350

  2. Modularizing gene regulation

    Molecular Systems Biology

  3. Multiprotein DNA looping

    Physical Review Letters, Vol. 96, Núm. 23

  4. Signal processing in the TGF-β superfamily ligand-receptor network

    PLoS Computational Biology, Vol. 2, Núm. 1, pp. 0036-0045

  5. Stochastic dynamics of macromolecular-assembly networks

    Molecular Systems Biology, Vol. 2

2005

  1. DNA looping in gene regulation: From the assembly of macromolecular complexes to the control of transcriptional noise

    Current Opinion in Genetics and Development, Vol. 15, Núm. 2, pp. 136-144

  2. Inferring the in vivo looping properties of DNA

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 102, Núm. 49, pp. 17642-17645

  3. The mesoscopic dynamics of thermodynamic systems

    Journal of Physical Chemistry B, Vol. 109, Núm. 46, pp. 21502-21515

2004

  1. From molecular noise to behavioural variability in a single bacterium

    Nature, Vol. 428, Núm. 6982, pp. 574-578