David
de Sancho Sánchez
Donostia International Physics Center
San Sebastián, EspañaPublicaciones en colaboración con investigadores/as de Donostia International Physics Center (24)
2024
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Atomistic molecular simulations of Aβ-Zn conformational ensembles
Proteins: Structure, Function and Bioinformatics, Vol. 92, Núm. 1, pp. 134-144
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Biallelic variants in SNUPN cause a limb girdle muscular dystrophy with myofibrillar-like features
Brain, Vol. 147, Núm. 8, pp. 2867-2883
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High-throughput virtual search of small molecules for controlling the mechanical stability of human CD4
Journal of Biological Chemistry, Vol. 300, Núm. 4
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Mixed Stereochemistry Macrocycle Acts as a Helix-Stabilizing Peptide N-Cap
Journal of the American Chemical Society, Vol. 146, Núm. 35, pp. 24348-24357
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The strongest protein binder is surprisingly labile
Protein Science, Vol. 33, Núm. 7
2023
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Compliant mechanical response of the ultrafast folding protein EnHD under force
Communications Physics, Vol. 6, Núm. 1
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Influence of metal binding on the conformational landscape of neurofilament peptides
Physical Chemistry Chemical Physics, Vol. 25, Núm. 39, pp. 26429-26442
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Rules governing metal coordination in Aβ-Zn(ii) complex models from quantum mechanical calculations
Physical Chemistry Chemical Physics, Vol. 25, Núm. 40, pp. 27618-27627
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Structural basis of domain destabilization by dilated-cardiomyopathy-causing missense mutations in titin
Biophysical journal, Vol. 122, Núm. 3S1
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Titin domains with reduced core hydrophobicity cause dilated cardiomyopathy
Cell reports, Vol. 42, Núm. 12, pp. 113490
2022
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Influence of the Nonprotein Amino Acid Mimosine in Peptide Conformational Propensities from Novel Amber Force Field Parameters
Journal of Physical Chemistry B, Vol. 126, Núm. 16, pp. 2959-2967
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Phase separation in amino acid mixtures is governed by composition
Biophysical Journal, Vol. 121, Núm. 21, pp. 4119-4127
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Prediction of Folding and Unfolding Rates of Proteins with Simple Models
Methods in Molecular Biology (Humana Press Inc.), pp. 365-372
2021
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Markov state models from hierarchical density-based assignment
Journal of Chemical Physics, Vol. 155, Núm. 5
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Mechanism of Hydrogen Sulfide-Dependent Inhibition of FeFe Hydrogenase
ACS Catalysis, Vol. 11, Núm. 24, pp. 15162-15176
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Nanomechanical Phenotypes in Cardiac Myosin-Binding Protein C Mutants That Cause Hypertrophic Cardiomyopathy
ACS Nano, Vol. 15, Núm. 6, pp. 10203-10216
2020
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Competitive binding of HIF-1α and CITED2 to the TAZ1 domain of CBP from molecular simulations
Physical Chemistry Chemical Physics, Vol. 22, Núm. 15, pp. 8118-8127
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Slow Folding of a Helical Protein: Large Barriers, Strong Internal Friction, or a Shallow, Bumpy Landscape?
The journal of physical chemistry. B, Vol. 124, Núm. 41, pp. 8973-8983
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Theoretical characterization of Al(III) binding to KSPVPKSPVEEKG: Insights into the propensity of aluminum to interact with key sequences for neurofilament formation
Journal of Inorganic Biochemistry, Vol. 210
2019
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An Abl-FBP17 mechanosensing system couples local plasma membrane curvature and stress fiber remodeling during mechanoadaptation
Nature Communications, Vol. 10, Núm. 1