Daniele
de Martino
Publicacions (35) Publicacions de Daniele de Martino
2023
-
Collective catalysis under spatial constraints: Phase separation and size-scaling effects on mass action kinetics
Physical Review E, Vol. 108, Núm. 4
-
Emergence of collective self-oscillations in minimal lattice models with feedback
Physical Review E, Vol. 108, Núm. 4
-
Probing Single-Cell Fermentation Fluxes and Exchange Networks via pH-Sensing Hybrid Nanofibers
ACS Nano, Vol. 17, Núm. 4, pp. 3313-3323
-
Statistical mechanics of biomolecular condensates via cavity methods
iScience, Vol. 26, Núm. 4
-
Statistical modeling of adaptive neural networks explains co-existence of avalanches and oscillations in resting human brain
Nature Computational Science, Vol. 3, Núm. 3, pp. 254-263
2022
-
Epidemic oscillations induced by social network control
Journal of Statistical Mechanics: Theory and Experiment, Vol. 2022, Núm. 1
-
Relationship between fitness and heterogeneity in exponentially growing microbial populations
Biophysical Journal, Vol. 121, Núm. 10, pp. 1919-1930
2019
-
Feedback-induced self-oscillations in large interacting systems subjected to phase transitions
Journal of Physics A: Mathematical and Theoretical, Vol. 52, Núm. 4
-
Oscillations in feedback-driven systems: Thermodynamics and noise
Physical Review E, Vol. 100, Núm. 6
2018
-
An introduction to the maximum entropy approach and its application to inference problems in biology
Heliyon, Vol. 4, Núm. 4
-
Statistical mechanics for metabolic networks during steady state growth
Nature Communications, Vol. 9, Núm. 1
2017
-
Maximum entropy modeling of metabolic networks by constraining growth-rate moments predicts coexistence of phenotypes
Physical Review E, Vol. 96, Núm. 6
-
Phase transitions in integer linear problems
Journal of Statistical Mechanics: Theory and Experiment, Vol. 2017, Núm. 9
-
Quantifying the entropic cost of cellular growth control
Physical Review E, Vol. 96, Núm. 1
-
Scales and multimodal flux distributions in stationary metabolic network models via thermodynamics
Physical Review E, Vol. 95, Núm. 6
2016
-
Asymptotic analysis of noisy fitness maximization, applied to metabolism & growth
Journal of Statistical Mechanics: Theory and Experiment, Vol. 2016, Núm. 12
-
Genome-scale estimate of the metabolic turnover of E. Coli from the energy balance analysis
Physical Biology, Vol. 13, Núm. 1
-
The dual of the space of interactions in neural network models
International Journal of Modern Physics C, Vol. 27, Núm. 6
2015
-
Over-relaxed hit-and-run Monte Carlo for the uniform sampling of convex bodies with applications in metabolic network biophysics
International Journal of Modern Physics C, Vol. 26, Núm. 1
-
Quantitative constraint-based computational model of tumor-to-stroma coupling via lactate shuttle
Scientific Reports, Vol. 5