Daniele
de Martino
Università de Roma La Sapienza
Roma, ItaliaPublicacions en col·laboració amb investigadors/es de Università de Roma La Sapienza (13)
2023
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Emergence of collective self-oscillations in minimal lattice models with feedback
Physical Review E, Vol. 108, Núm. 4
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Statistical mechanics of biomolecular condensates via cavity methods
iScience, Vol. 26, Núm. 4
2017
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Phase transitions in integer linear problems
Journal of Statistical Mechanics: Theory and Experiment, Vol. 2017, Núm. 9
2015
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Quantitative constraint-based computational model of tumor-to-stroma coupling via lactate shuttle
Scientific Reports, Vol. 5
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Uniform sampling of steady states in metabolic networks:Heterogeneous scales and rounding
PLoS ONE, Vol. 10, Núm. 4
2014
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Identifying all moiety conservation laws in genome-scale metabolic networks
PLoS ONE, Vol. 9, Núm. 7
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Inferring metabolic phenotypes from the exometabolome through a thermodynamic variational principle
New Journal of Physics, Vol. 16
2013
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Counting and correcting thermodynamically infeasible flux cycles in genome-scale metabolic networks
Metabolites, Vol. 3, Núm. 4, pp. 946-966
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Thermodynamics of biochemical networks and duality theorems
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, Vol. 87, Núm. 5
2012
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A scalable algorithm to explore the Gibbs energy landscape of genome-scale metabolic networks
PLoS Computational Biology, Vol. 8, Núm. 6
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Phase transitions in crowd dynamics of resource allocation
Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, Vol. 85, Núm. 2
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Reaction networks as systems for resource allocation: A variational principle for their non-equilibrium steady states
PLoS ONE, Vol. 7, Núm. 7
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Topology-induced inverse phase transitions
EPL, Vol. 98, Núm. 4