Publications en collaboration avec des chercheurs de University of California, Davis (16)

2023

  1. Dynamics-informed deconvolutional neural networks for super-resolution identification of regime changes in epidemiological time series

    Science advances, Vol. 9, Núm. 28, pp. eadf0673

  2. Multi-landmark alignment of genomic signals reveals conserved expression patterns across transcription start sites

    Scientific reports, Vol. 13, Núm. 1, pp. 10835

2022

  1. Robustness of DNA looping across multiple cell divisions in individual bacteria

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 119, Núm. 33

2021

  1. All-or-none amyloid disassembly via chaperone-triggered fibril unzipping favors clearance of α-synuclein toxic species

    Proceedings of the National Academy of Sciences of the United States of America, Vol. 118, Núm. 36

  2. Ascertaining the initiation of epidemic resurgences: An application to the COVID-19 second surges in Europe and the Northeast United States

    Royal Society Open Science, Vol. 8, Núm. 10

  3. Reliably quantifying the evolving worldwide dynamic state of the COVID-19 outbreak from death records, clinical parametrization, and demographic data

    Scientific Reports, Vol. 11, Núm. 1

2018

  1. Clearly Detectable, Kinetically Restricted Solid-Solid Phase Transition in cis-Ceramide Monolayers

    Langmuir, Vol. 34, Núm. 39, pp. 11749-11758

2017

  1. Computing at the Front-End by Receptor Networks

    Cell Systems

2014

  1. Suppression and enhancement of transcriptional noise by DNA looping

    Physical Review E - Statistical, Nonlinear, and Soft Matter Physics, Vol. 89, Núm. 6

2013

  1. Reliable prediction of complex phenotypes from a modular design in free energy space: An extensive exploration of the lac operon

    ACS Synthetic Biology, Vol. 2, Núm. 10, pp. 576-586

  2. Systems biophysics of gene expression

    Biophysical Journal, Vol. 104, Núm. 12, pp. 2574-2585

2011

  1. Control of gene expression by modulated self-assembly

    Nucleic Acids Research, Vol. 39, Núm. 16, pp. 6854-6863

  2. Trafficking coordinate description of intracellular transport control of signaling networks

    Biophysical Journal, Vol. 101, Núm. 10, pp. 2315-2323

2010

  1. CplexA: A Mathematica package to study macromolecular-assembly control of gene expression

    Bioinformatics, Vol. 26, Núm. 16, pp. 2060-2061

2008

  1. Ab initio thermodynamic modeling of distal multisite transcription regulation

    Nucleic Acids Research, Vol. 36, Núm. 3, pp. 726-731

  2. Protein-protein/DNA interaction networks: Versatile macromolecular structures for the control of gene expression

    IET Systems Biology